STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY84134.1Inorganic anion transporter, SulP family protein; [P] COG0659 Sulfate permease and related transporters (MFS superfamily). (579 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.713
EDY80889.1
Aldehyde dehydrogenase (NAD) family protein; [E] COG0506 Proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.712
EDY81313.1
Ser/Thr protein phosphatase family protein.
   
   0.639
glsA
[E] COG2066 Glutaminase; Belongs to the glutaminase family.
   
 
  0.622
EDY81984.1
TonB family C-terminal domain protein; [R] COG0666 FOG: Ankyrin repeat.
    
 
 0.613
EDY83998.1
Proton-translocating NADH-quinone oxidoreductase, chain M subfamily; [C] COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
 
 0.596
EDY83300.1
[R] COG0666 FOG: Ankyrin repeat.
    
 
 0.574
EDY84096.1
Regulator of chromosome condensation domain protein; [DZ] COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins.
  
 
   0.500
EDY82064.1
AMP-binding enzyme domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
   
 
 0.460
EDY83602.1
[P] COG0288 Carbonic anhydrase.
 
 
 0.437
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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