node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDY80617.1 | trmB | VDG1235_233 | VDG1235_3842 | [J] COG0172 Seryl-tRNA synthetase. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.538 |
EDY81251.1 | trmB | VDG1235_869 | VDG1235_3842 | AMP-binding enzyme, putative; [IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.591 |
EDY81421.1 | trmB | VDG1235_1039 | VDG1235_3842 | NOL1/NOP2/sun family, putative; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.592 |
EDY81421.1 | truA | VDG1235_1039 | VDG1235_4689 | NOL1/NOP2/sun family, putative; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.433 |
EDY81421.1 | truB | VDG1235_1039 | VDG1235_288 | NOL1/NOP2/sun family, putative; [J] COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.904 |
EDY81912.1 | trmB | VDG1235_1532 | VDG1235_3842 | Hypothetical protein; [S] COG1432 Uncharacterized conserved protein. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.535 |
EDY83068.1 | EDY83966.1 | VDG1235_2692 | VDG1235_3593 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG5002 Signal transduction histidine kinase. | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.994 |
EDY83068.1 | mnmG | VDG1235_2692 | VDG1235_3282 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG5002 Signal transduction histidine kinase. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.452 |
EDY83068.1 | trmB | VDG1235_2692 | VDG1235_3842 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG5002 Signal transduction histidine kinase. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.554 |
EDY83966.1 | EDY83068.1 | VDG1235_3593 | VDG1235_2692 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG5002 Signal transduction histidine kinase. | 0.994 |
EDY83966.1 | mnmG | VDG1235_3593 | VDG1235_3282 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.450 |
EDY83966.1 | trmB | VDG1235_3593 | VDG1235_3842 | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.543 |
mnmE | mnmG | VDG1235_4009 | VDG1235_3282 | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.997 |
mnmE | trmB | VDG1235_4009 | VDG1235_3842 | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.480 |
mnmE | truA | VDG1235_4009 | VDG1235_4689 | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.500 |
mnmG | EDY83068.1 | VDG1235_3282 | VDG1235_2692 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG5002 Signal transduction histidine kinase. | 0.452 |
mnmG | EDY83966.1 | VDG1235_3282 | VDG1235_3593 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.450 |
mnmG | mnmE | VDG1235_3282 | VDG1235_4009 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.997 |
mnmG | trmB | VDG1235_3282 | VDG1235_3842 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | Putative methyltransferase superfamily; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.547 |
mnmG | truA | VDG1235_3282 | VDG1235_4689 | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.429 |