STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY80773.1Mannosyl-3-phosphoglycerate synthase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (400 aa)    
Predicted Functional Partners:
EDY83927.1
Mannosyl-3-phosphoglycerate phosphatase family; [R] COG3769 Predicted hydrolase (HAD superfamily).
   
  0.980
EDY82189.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
  
 
 0.844
EDY80504.1
Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
    
 0.725
EDY82064.1
AMP-binding enzyme domain protein; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
  
 
 0.667
EDY81662.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
    
 0.647
EDY81861.1
Polysaccharide deacetylase domain protein.
  
 
 0.647
EDY82254.1
Hypothetical protein.
  
 
 0.647
EDY84566.1
Polysaccharide deacetylase domain protein; [G] COG0726 Predicted xylanase/chitin deacetylase.
  
 
 0.647
EDY83943.1
Hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
  0.640
EDY80910.1
Peptidase, M28 family; [R] COG2234 Predicted aminopeptidases.
 
      0.623
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.