STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY84391.1DNA-3-methyladenine glycosylase subfamily; [L] COG2094 3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family. (175 aa)    
Predicted Functional Partners:
EDY84239.1
[L] COG0708 Exonuclease III.
    
 0.778
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region domain protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.773
EDY84976.1
Kinase, pfkB family; [G] COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB).
       0.561
EDY83568.1
methylated-DNA-(protein)-cysteine S-methyltransferase; [F] COG2169 Adenosine deaminase.
  
  
 0.492
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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