STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY84477.1Hypothetical protein. (711 aa)    
Predicted Functional Partners:
EDY84748.1
Hypothetical protein.
  
     0.746
EDY81749.1
Competence/damage-inducible protein CinA N-terminal domain, putative; [R] COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.
  
 
  0.736
EDY80489.1
Hypothetical protein.
  
     0.716
EDY80878.1
Hypothetical protein.
  
    0.703
EDY85210.1
Cellulase (glycosyl hydrolase family 5); [G] COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.698
EDY80658.1
Hypothetical protein.
  
     0.692
EDY83538.1
Hypothetical protein; [U] COG0823 Periplasmic component of the Tol biopolymer transport system; WD40-like Beta Propeller Repeat.
  
    0.650
EDY80545.1
UTP--glucose-1-phosphate uridylyltransferase subfamily, putative; [G] COG4284 UDP-glucose pyrophosphorylase.
  
     0.638
EDY80851.1
[F] COG0516 IMP dehydrogenase/GMP reductase.
  
 
  0.638
EDY82627.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.635
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.