Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDY80449.1 | EDY81168.1 | VDG1235_63 | VDG1235_785 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.999 |
| EDY80449.1 | EDY82346.1 | VDG1235_63 | VDG1235_1967 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.999 |
| EDY80449.1 | EDY83078.1 | VDG1235_63 | VDG1235_2702 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.991 |
| EDY80449.1 | EDY84013.1 | VDG1235_63 | VDG1235_3640 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [G] COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.905 |
| EDY80449.1 | EDY84101.1 | VDG1235_63 | VDG1235_3730 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [F] COG0105 Nucleoside diphosphate kinase. | 0.930 |
| EDY80449.1 | EDY84456.1 | VDG1235_63 | VDG1235_4087 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.965 |
| EDY80449.1 | EDY84495.1 | VDG1235_63 | VDG1235_4126 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | Tetratricopeptide repeat domain protein. | 0.781 |
| EDY80449.1 | EDY84588.1 | VDG1235_63 | VDG1235_4219 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.965 |
| EDY80449.1 | EDY84901.1 | VDG1235_63 | VDG1235_4535 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.999 |
| EDY80449.1 | ribB | VDG1235_63 | VDG1235_3209 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 3,4-dihydroxy-2-butanone 4-phosphate synthase family; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.940 |
| EDY81168.1 | EDY80449.1 | VDG1235_785 | VDG1235_63 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.999 |
| EDY81168.1 | EDY82346.1 | VDG1235_785 | VDG1235_1967 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.997 |
| EDY81168.1 | EDY83078.1 | VDG1235_785 | VDG1235_2702 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.964 |
| EDY81168.1 | EDY84013.1 | VDG1235_785 | VDG1235_3640 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [G] COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.804 |
| EDY81168.1 | EDY84101.1 | VDG1235_785 | VDG1235_3730 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [F] COG0105 Nucleoside diphosphate kinase. | 0.807 |
| EDY81168.1 | EDY84456.1 | VDG1235_785 | VDG1235_4087 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.905 |
| EDY81168.1 | EDY84495.1 | VDG1235_785 | VDG1235_4126 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | Tetratricopeptide repeat domain protein. | 0.744 |
| EDY81168.1 | EDY84588.1 | VDG1235_785 | VDG1235_4219 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.905 |
| EDY81168.1 | EDY84901.1 | VDG1235_785 | VDG1235_4535 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 0.999 |
| EDY81168.1 | ribB | VDG1235_785 | VDG1235_3209 | ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase. | 3,4-dihydroxy-2-butanone 4-phosphate synthase family; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.905 |
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