STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY84782.1Bacterial microcompartments protein family; [QC] COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein. (105 aa)    
Predicted Functional Partners:
EDY80704.1
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; [QC] COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.965
EDY80828.1
Hypothetical protein; [C] COG1012 NAD-dependent aldehyde dehydrogenases.
 
  
 0.892
EDY82167.1
Hypothetical protein.
   
 
 0.816
EDY84768.1
Hypothetical protein; [QC] COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
   
 
 0.816
EDY81199.1
Hypothetical protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
  
 0.800
ackA-2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.601
EDY82852.1
Bacterial microcompartments protein family; [QC] COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
    
0.516
EDY84974.1
Bacterial microcompartments protein family; [QC] COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
    
0.451
EDY80884.1
Class II Aldolase and Adducin N-terminal domain protein; [G] COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases.
       0.403
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.