STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY84811.1ABC-2 type transporter superfamily; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component. (220 aa)    
Predicted Functional Partners:
EDY83421.1
ABC transporter, ATP-binding protein; [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
 0.998
EDY80530.1
ABC transporter, ATP-binding protein; [GM] COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
 0.995
EDY81662.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
 
 0.959
EDY80445.1
ABC-2 type transporter superfamily; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
  0.954
EDY82189.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
  
 0.909
EDY84202.1
Methyltransferase domain family; [QR] COG0500 SAM-dependent methyltransferases.
 
     0.820
EDY84983.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
  
 0.775
EDY80504.1
Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.727
EDY82397.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
  
 0.618
EDY81947.1
Hypothetical protein.
       0.608
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.