Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDY80434.1 | EDY80752.1 | VDG1235_48 | VDG1235_369 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | 0.874 |
| EDY80434.1 | EDY81179.1 | VDG1235_48 | VDG1235_796 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | [S] COG2911 Uncharacterized protein conserved in bacteria. | 0.623 |
| EDY80434.1 | EDY82485.1 | VDG1235_48 | VDG1235_2108 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | Type III restriction enzyme, res subunit family; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.885 |
| EDY80434.1 | EDY82957.1 | VDG1235_48 | VDG1235_2580 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.664 |
| EDY80434.1 | EDY82963.1 | VDG1235_48 | VDG1235_2586 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | Hypothetical protein. | 0.698 |
| EDY80434.1 | EDY83615.1 | VDG1235_48 | VDG1235_3242 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | Elongation factor G, domain IV family; [J] COG0480 Translation elongation factors (GTPases). | 0.921 |
| EDY80434.1 | EDY83891.1 | VDG1235_48 | VDG1235_3518 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | Type III restriction enzyme, res subunit family; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.838 |
| EDY80434.1 | EDY84254.1 | VDG1235_48 | VDG1235_3885 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | [L] COG1643 HrpA-like helicases. | 0.908 |
| EDY80434.1 | fusA | VDG1235_48 | VDG1235_171 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.921 |
| EDY80434.1 | fusA-2 | VDG1235_48 | VDG1235_2827 | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.921 |
| EDY80752.1 | EDY80434.1 | VDG1235_369 | VDG1235_48 | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | 0.874 |
| EDY80752.1 | EDY82485.1 | VDG1235_369 | VDG1235_2108 | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | Type III restriction enzyme, res subunit family; [KL] COG1061 DNA or RNA helicases of superfamily II. | 0.926 |
| EDY80752.1 | EDY83615.1 | VDG1235_369 | VDG1235_3242 | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | Elongation factor G, domain IV family; [J] COG0480 Translation elongation factors (GTPases). | 0.552 |
| EDY80752.1 | EDY83891.1 | VDG1235_369 | VDG1235_3518 | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | Type III restriction enzyme, res subunit family; [KL] COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.828 |
| EDY80752.1 | fusA | VDG1235_369 | VDG1235_171 | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.552 |
| EDY80752.1 | fusA-2 | VDG1235_369 | VDG1235_2827 | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] | 0.552 |
| EDY81179.1 | EDY80434.1 | VDG1235_796 | VDG1235_48 | [S] COG2911 Uncharacterized protein conserved in bacteria. | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | 0.623 |
| EDY81179.1 | EDY82963.1 | VDG1235_796 | VDG1235_2586 | [S] COG2911 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.620 |
| EDY82485.1 | EDY80434.1 | VDG1235_2108 | VDG1235_48 | Type III restriction enzyme, res subunit family; [KL] COG1061 DNA or RNA helicases of superfamily II. | DEAD/DEAH box helicase domain protein; [L] COG4581 Superfamily II RNA helicase. | 0.885 |
| EDY82485.1 | EDY80752.1 | VDG1235_2108 | VDG1235_369 | Type III restriction enzyme, res subunit family; [KL] COG1061 DNA or RNA helicases of superfamily II. | ATP-dependent helicase C-terminal domain family; [L] COG1643 HrpA-like helicases. | 0.926 |
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