STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY85184.1Hypothetical protein; [R] COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (276 aa)    
Predicted Functional Partners:
EDY83563.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.954
EDY84874.1
Hypothetical protein.
       0.741
EDY82972.1
Hypothetical protein.
  
 
 0.736
EDY83930.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.713
EDY83392.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.711
EDY81440.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.669
EDY82646.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.669
EDY84188.1
ABC transporter, ATP-binding protein, putative; [V] COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.669
EDY84611.1
ABC transporter, ATP-binding protein, putative; [R] COG0457 FOG: TPR repeat.
  
 0.669
EDY84679.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
  
 0.669
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.