STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY85197.1[TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (231 aa)    
Predicted Functional Partners:
EDY80787.1
PAS fold family; [T] COG2202 FOG: PAS/PAC domain.
 
 0.932
EDY81023.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
 0.920
EDY84334.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
 0.900
EDY84372.1
PAS fold family; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.888
EDY82182.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 0.884
EDY84901.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 
 0.883
EDY84714.1
Hypothetical protein; [T] COG0784 FOG: CheY-like receiver; response regulator receiver domain, putative.
 
 0.882
EDY82346.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
 0.880
EDY80449.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
0.878
EDY81441.1
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; [T] COG0642 Signal transduction histidine kinase.
 
  0.875
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.