STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY80436.1Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis. (327 aa)    
Predicted Functional Partners:
EDY80504.1
Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.808
EDY80595.1
Hypothetical protein.
       0.732
EDY82189.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
 0.728
EDY80422.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases; overlaps another CDS with the same product name.
 
  
  0.654
EDY81855.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.649
EDY82747.1
Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.615
EDY81662.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
 
 
 0.603
EDY84299.1
NAD dependent epimerase/dehydratase family; [M] COG1088 dTDP-D-glucose 4,6-dehydratase.
  
 
  0.562
EDY80445.1
ABC-2 type transporter superfamily; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
  
 0.542
EDY82397.1
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
  
  
  0.539
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.