STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY81226.1FeS assembly ATPase SufC; [O] COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component. (255 aa)    
Predicted Functional Partners:
EDY81781.1
FeS assembly protein SufB; [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 0.999
EDY84409.1
FeS assembly protein SufD; [O] COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.
 
 0.998
EDY82581.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.994
EDY84750.1
Hypothetical protein; [C] COG0822 NifU homolog involved in Fe-S cluster formation; NifU-like N terminal domain, putative.
 
  
 0.980
EDY81182.1
Aminotransferase, class V superfamily; [E] COG0520 Selenocysteine lyase.
  
 0.941
EDY80840.1
Conserved domain protein; [R] COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
  
 0.868
EDY80725.1
Fe-S metabolism associated domain subfamily; [R] COG2166 SufE protein probably involved in Fe-S center assembly.
 
   0.808
EDY81306.1
Conserved domain protein; [R] COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
  
 0.795
EDY83756.1
Transcriptional regulator, Fur family; [P] COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
     
 0.751
EDY83498.1
Hypothetical protein; [S] COG0316 Uncharacterized conserved protein; HesB-like domain, putative; Belongs to the HesB/IscA family.
  
 
 0.555
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.