STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDY81365.1Oxidoreductase, aldo/keto reductase family; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (309 aa)    
Predicted Functional Partners:
EDY82911.1
[C] COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
  
    0.763
EDY83088.1
Transketolase, C-terminal domain protein; [C] COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit.
       0.699
EDY80607.1
[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
  0.676
EDY81195.1
Methyltransferase domain family; [QR] COG0500 SAM-dependent methyltransferases.
  
    0.564
EDY83833.1
[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
  0.511
EDY85216.1
[R] COG0656 Aldo/keto reductases, related to diketogulonate reductase.
   
  0.413
EDY81419.1
Hypothetical protein.
       0.408
EDY82506.1
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
       0.408
EDY83869.1
Hypothetical protein.
       0.408
EDY84690.1
[E] COG0367 Asparagine synthase (glutamine-hydrolyzing).
       0.408
Your Current Organism:
Verrucomicrobiae bacterium DG1235
NCBI taxonomy Id: 382464
Other names: V. bacterium DG1235, Verrucomicrobiae bacterium str. DG1235, Verrucomicrobiae bacterium strain DG1235, Verrucomicrobiales bacterium DG1235
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.