Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hac_0163 | Hac_0999 | Hac_0163 | Hac_0999 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Conserved hypothetical protein. | 0.625 |
Hac_0163 | Hac_1143 | Hac_0163 | Hac_1143 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Conserved hypothetical protein; (P27243) O-antigen ligase; Function unclear. | 0.559 |
Hac_0163 | Hac_1414 | Hac_0163 | Hac_1414 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Conserved hypothetical protein. | 0.682 |
Hac_0163 | Hac_1425 | Hac_0163 | Hac_1425 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Conserved hypothetical protein. | 0.662 |
Hac_0163 | Hac_1525 | Hac_0163 | Hac_1525 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Conserved hypothetical protein. | 0.666 |
Hac_0163 | Hac_1690 | Hac_0163 | Hac_1690 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Conserved hypothetical protein with DUF394 domain. | 0.841 |
Hac_0163 | frpB | Hac_0163 | Hac_0072 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Iron-regulated outer membrane protein; Function unclear. | 0.525 |
Hac_0163 | frpB-3 | Hac_0163 | Hac_1241 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Iron-regulated outer membrane protein; (P44523) Heme/hemopexin utilization protein C precursor; Function unclear. | 0.481 |
Hac_0163 | rfaJ | Hac_0163 | Hac_0021 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Lipopolysaccharide biosynthesis protein; Lipopolysaccharide 1,2-glucosyltransferase (rfaJ); High confidence in function and specificity. | 0.615 |
Hac_0163 | tolC | Hac_0163 | Hac_1397 | Conserved hypothetical protein; Similar to HP1457; Function unclear. | Outer membrane protein precursor; Function unclear. | 0.583 |
Hac_0999 | Hac_0163 | Hac_0999 | Hac_0163 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to HP1457; Function unclear. | 0.625 |
Hac_0999 | Hac_1143 | Hac_0999 | Hac_1143 | Conserved hypothetical protein. | Conserved hypothetical protein; (P27243) O-antigen ligase; Function unclear. | 0.777 |
Hac_0999 | Hac_1414 | Hac_0999 | Hac_1414 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.747 |
Hac_0999 | Hac_1425 | Hac_0999 | Hac_1425 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.779 |
Hac_0999 | Hac_1525 | Hac_0999 | Hac_1525 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.774 |
Hac_0999 | Hac_1690 | Hac_0999 | Hac_1690 | Conserved hypothetical protein. | Conserved hypothetical protein with DUF394 domain. | 0.707 |
Hac_0999 | frpB | Hac_0999 | Hac_0072 | Conserved hypothetical protein. | Iron-regulated outer membrane protein; Function unclear. | 0.946 |
Hac_0999 | frpB-3 | Hac_0999 | Hac_1241 | Conserved hypothetical protein. | Iron-regulated outer membrane protein; (P44523) Heme/hemopexin utilization protein C precursor; Function unclear. | 0.760 |
Hac_0999 | rfaJ | Hac_0999 | Hac_0021 | Conserved hypothetical protein. | Lipopolysaccharide biosynthesis protein; Lipopolysaccharide 1,2-glucosyltransferase (rfaJ); High confidence in function and specificity. | 0.772 |
Hac_0999 | tolC | Hac_0999 | Hac_1397 | Conserved hypothetical protein. | Outer membrane protein precursor; Function unclear. | 0.781 |
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