STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101494722Calcium-binding protein KRP1-like. (120 aa)    
Predicted Functional Partners:
LOC101502397
DNA repair protein RAD4 isoform X1.
    
 0.827
LOC101502529
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
   
 
 0.700
LOC101509692
Kinesin-like protein KIN-14I; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.689
LOC101502288
Kinesin-like protein KIN-14E isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.689
LOC101509265
Enhanced ethylene response protein 5.
    
 
 0.609
LOC101507112
SAC3 family protein B isoform X1.
    
 
 0.604
LOC101494567
SAC3 family protein C.
    
 
 0.604
LOC101512663
LOW QUALITY PROTEIN: cullin-4; Belongs to the cullin family.
     
 0.541
LOC101500479
Ubiquitin receptor RAD23d-like.
   
 0.526
LOC101501685
Ubiquitin receptor RAD23c-like.
   
 0.526
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.