STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101504658Embryonic abundant protein VF30.1-like. (267 aa)    
Predicted Functional Partners:
LOC101508725
Uncharacterized protein LOC101508725.
   
 0.694
LOC101492546
Uncharacterized protein PB18E9.04c-like.
   
 0.694
LOC101492141
Uncharacterized protein LOC101492141.
   
 0.694
LOC101490320
Uncharacterized protein LOC101490320.
   
 0.694
LOC101512953
Transcription repressor OFP8-like.
  
 
  0.527
LOC101514073
Uncharacterized protein LOC101514073.
  
     0.524
LOC105853028
Uncharacterized protein LOC105853028.
  
 
   0.510
LOC113788030
G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3.
  
     0.509
LOC101491047
Nitrate regulatory gene2 protein.
  
 
  0.508
LOC101503098
Transcription repressor OFP4.
  
     0.494
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.