STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101515394Protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5. (462 aa)    
Predicted Functional Partners:
LOC101502588
ESCRT-related protein CHMP1B.
    
 0.997
LOC101509656
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1; Belongs to the AAA ATPase family.
   
 0.997
LOC101511576
Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like; Belongs to the AAA ATPase family.
   
 0.997
LOC101490804
Vacuolar protein sorting-associated protein 60.1-like isoform X2.
   
 0.994
LOC101511255
Subtilisin-like protease SBT5.3; Belongs to the peptidase S8 family.
   
 0.974
LOC101507844
Vacuolar protein sorting-associated protein 24 homolog 1.
    
 0.897
LOC101491091
GTP cyclohydrolase 1-like.
   
   0.897
LOC101508306
GTP cyclohydrolase 1-like.
   
   0.897
LOC101508673
pre-mRNA-splicing factor SPF27 homolog.
   
   0.891
LOC101493280
pre-mRNA-splicing factor SPF27 homolog.
   
   0.891
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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