STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101508628Uncharacterized protein LOC101508628. (310 aa)    
Predicted Functional Partners:
LOC101512540
Uncharacterized protein LOC101512540.
  
 
  0.522
LOC101502449
Cellulose synthase-like protein E1.
  
   0.504
LOC101512642
F-box protein PP2-A13-like.
  
 
  0.490
LOC101510593
Uncharacterized protein LOC101510593.
  
  0.473
LOC101507907
F-box protein PP2-A13.
  
 
  0.469
LOC101504386
Serine/threonine-protein kinase ATG1t; Belongs to the protein kinase superfamily.
   
 
 0.465
LOC101510367
Provicilin-like.
  
 
  0.460
LOC101503723
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.458
LOC101507449
Chromatin structure-remodeling complex protein SYD isoform X1.
    
 0.452
LOC101504144
Basic 7S globulin-like; Belongs to the peptidase A1 family.
  
     0.447
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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