STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101510340pre-mRNA-splicing factor ISY1 homolog. (303 aa)    
Predicted Functional Partners:
LOC101500879
pre-mRNA-splicing factor SYF1.
    
 0.994
LOC101510265
pre-mRNA-processing factor 19 homolog 2.
    
 0.989
LOC101515248
Zinc finger CCCH domain-containing protein 40-like.
   
 0.989
LOC101503280
Crooked neck-like protein 1.
   
 0.984
LOC101507663
Crooked neck-like protein 1.
   
 0.984
LOC101497402
pre-mRNA-splicing factor syf2.
   
 
 0.982
LOC101490489
RNA helicase aquarius.
    
 0.982
LOC101510839
pre-mRNA-processing-splicing factor 8A.
    
 
 0.977
LOC101511962
Cell division cycle 5-like protein.
    
 
 0.977
LOC101501308
SNW/SKI-interacting protein A-like.
    
 0.976
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.