STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101504455Transcription factor TGA2.3-like. (458 aa)    
Predicted Functional Partners:
LOC101511571
Something about silencing protein 10 isoform X1.
   
 0.845
LOC101506536
DEAD-box ATP-dependent RNA helicase 36; Belongs to the DEAD box helicase family.
   
 0.840
LOC101505995
Nucleolar protein 14.
   
 0.827
LOC101494135
pre-mRNA-splicing factor CWC22 homolog.
   
 0.820
LOC101499189
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.815
LOC101497402
pre-mRNA-splicing factor syf2.
    
 0.813
LOC101507165
pre-mRNA-splicing factor 18.
    
 0.796
LOC101511568
U3 small nucleolar ribonucleoprotein protein IMP3.
   
  0.794
LOC101491846
Uncharacterized protein C57A7.06.
   
 0.790
LOC101504988
Uncharacterized protein LOC101504988.
   
 0.790
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.