STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101511108Uncharacterized protein LOC101511108. (137 aa)    
Predicted Functional Partners:
LOC101492602
Uncharacterized protein LOC101492602.
  
     0.501
LOC101494208
Uncharacterized protein LOC101494208.
  
     0.490
LOC101504532
Short transmembrane mitochondrial protein 1-like.
  
     0.477
LOC101506721
Uncharacterized protein LOC101506721 isoform X1.
  
     0.463
LOC101489086
VQ motif-containing protein 25-like.
  
     0.438
LOC101489126
Auxin-responsive protein SAUR72.
  
     0.437
LOC101505346
Auxin-responsive protein SAUR50-like.
  
     0.434
LOC101504470
F-box protein PP2.
  
     0.426
LOC101495244
Uncharacterized protein LOC101495244.
  
     0.423
LOC101497750
Uncharacterized protein LOC101497750 isoform X1.
  
     0.417
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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