Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC101502950Proline-rich receptor-like protein kinase PERK3. (722 aa)    
Predicted Functional Partners:
LOC101515215
Transmembrane protein adipocyte-associated 1-like.
      
 0.577
LOC101501680
High-affinity nitrate transporter; Involved in nitrate transport.
      
 0.529
LOC101507474
Transcription factor AS1.
      
 0.500
LOC101507091
RING-type E3 ubiquitin transferase.
      
 0.494
LOC101498925
LOW QUALITY PROTEIN: U-box domain-containing protein 44-like.
      
 0.494
LOC101505692
Putative vesicle-associated membrane protein 726-like; Belongs to the synaptobrevin family.
      
 0.491
LOC101499830
Protease Do-like 1, chloroplastic.
      
 0.475
LOC101507942
Delta(24)-sterol reductase.
      
 0.417
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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