Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC101490470Probable serine/threonine-protein kinase At1g54610. (569 aa)    
Predicted Functional Partners:
LOC101510875
Cyclin-dependent kinase D-3-like; Belongs to the protein kinase superfamily.
    
 0.681
LOC101489315
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.610
LOC101499259
cyclin-T1-4-like isoform X1; Belongs to the cyclin family.
    
 0.576
LOC101509753
cyclin-T1-3-like isoform X1; Belongs to the cyclin family.
    
 0.576
LOC101507367
cyclin-T1-3-like isoform X1; Belongs to the cyclin family.
    
 0.576
LOC101491717
cyclin-T1-3-like isoform X1; Belongs to the cyclin family.
    
 0.576
LOC101514893
Histone-lysine N-methyltransferase ASHH1.
   
 
 0.543
LOC101503412
Histone-lysine N-methyltransferase ASHH2 isoform X1.
   
 
 0.543
LOC101498093
DNA-directed RNA polymerases II, IV and V subunit 3-like.
     
 0.540
LOC101509290
Protein RNA-directed DNA methylation 3.
    
 0.535
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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