STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101509385Iron-sulfur assembly protein IscA-like 2, mitochondrial. (163 aa)    
Predicted Functional Partners:
LOC101491327
Uncharacterized protein LOC101491327.
  
 
 0.898
LOC101502413
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
 0.809
LOC101493428
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.795
LOC101490256
Uncharacterized protein LOC101490256.
  
 
 0.772
LOC101506000
Uncharacterized protein LOC101506000.
   
 
 0.766
LOC101499869
peptidyl-tRNA hydrolase ICT1, mitochondrial.
   
 
 0.719
LOC101508273
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.711
LOC101498629
Thymidine kinase.
  
  
 0.705
LOC101510143
Uncharacterized protein LOC101510143.
   
 
 0.699
LOC101512971
50S ribosomal protein L9, chloroplastic.
   
 
 0.699
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.