STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101489062Bifunctional fucokinase/fucose pyrophosphorylase. (1048 aa)    
Predicted Functional Partners:
LOC101494846
Phosphotransferase.
     
 0.824
LOC101500811
Phosphotransferase.
     
 0.818
LOC101503369
Sorbitol dehydrogenase.
    
  0.810
LOC101494379
Phosphotransferase.
     
 0.805
LOC101513398
Phosphotransferase.
     
 0.801
LOC101489792
Phosphotransferase.
     
 0.801
LOC101489163
Phosphotransferase.
     
 0.801
LOC101492355
Mannan endo-1,4-beta-mannosidase 2; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
  0.800
LOC101507630
Probable fructokinase-4; Belongs to the carbohydrate kinase PfkB family.
     
  0.800
LOC101495617
Probable fructokinase-6, chloroplastic; Belongs to the carbohydrate kinase PfkB family.
     
  0.800
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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