STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101498037Transcription repressor OFP6. (194 aa)    
Predicted Functional Partners:
LOC101508506
Uncharacterized protein LOC101508506.
  
     0.516
LOC101513776
Pectinesterase inhibitor 6-like.
  
     0.509
LOC101508990
Uncharacterized protein LOC101508990.
  
     0.499
LOC101495890
Uncharacterized protein LOC101495890.
  
     0.489
LOC101492750
Pectinesterase inhibitor 6.
  
     0.488
LOC101509122
CBS domain-containing protein CBSX5.
  
     0.484
LOC101492812
F-box/kelch-repeat protein At1g23390.
  
     0.480
ARF11
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.477
LOC101505075
Uncharacterized protein LOC101505075.
  
     0.477
NAC4
NAC family transcription factor 4.
  
     0.474
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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