STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101507390E3 ubiquitin-protein ligase SP1. (341 aa)    
Predicted Functional Partners:
LOC101502019
Ubiquitinyl hydrolase 1.
     
 0.603
LOC101489555
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
     
 0.603
LOC101490657
UBX domain-containing protein.
    
  0.563
LOC101500237
Interferon-related developmental regulator 1.
   
 
  0.559
LOC101507473
ABC transporter F family member 4.
   
  
 0.534
LOC101501599
Coiled-coil domain-containing protein 22.
   
 
  0.510
LOC101494112
ubiquitin-40S ribosomal protein S27a.
    
  0.504
UBQ5
Ubiquitin 5.
    
  0.504
LOC113784581
Protein HOTHEAD-like.
  
   
 0.486
LOC101503599
Mitochondrial Rho GTPase.
     
 0.474
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.