STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101493829glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (794 aa)    
Predicted Functional Partners:
LOC101492339
Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.998
LOC101492814
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
  
 0.991
LOC101506446
isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.988
LOC101506554
leucine--tRNA ligase, cytoplasmic isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.985
LOC101488280
proline--tRNA ligase, cytoplasmic.
 
 0.978
LOC101497954
proline--tRNA ligase, cytoplasmic-like isoform X1.
 
 0.975
LOC101492631
60S ribosomal protein L21-1-like.
   
 0.974
LOC101514165
60S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.971
LOC101506184
glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.969
LOC101507696
glutamate--tRNA ligase, cytoplasmic-like; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.969
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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