STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101501919Casein kinase I-like; Belongs to the protein kinase superfamily. (423 aa)    
Predicted Functional Partners:
LOC101498904
Bystin.
    
 0.648
LOC101493654
Serine/threonine-protein kinase rio2.
    
 0.635
LOC101513976
Protein LTV1 homolog isoform X1.
    
 0.629
LOC101508447
Protein LTV1 homolog.
    
 0.629
LOC101488430
pre-rRNA-processing protein TSR1 homolog.
    
 0.595
LOC101515029
RNA-binding protein NOB1.
    
 0.547
LOC101494210
Uncharacterized protein LOC101494210 isoform X1.
   
 
  0.446
LOC101494965
40S ribosomal protein S29.
    
  0.444
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.