STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101514171Putative pentatricopeptide repeat-containing protein At1g26500. (496 aa)    
Predicted Functional Partners:
LOC101505679
Pentatricopeptide repeat-containing protein At2g15820, chloroplastic.
  
     0.467
LOC101507691
Protein WHAT'S THIS FACTOR 9, mitochondrial.
  
     0.458
LOC101494945
Uncharacterized protein LOC101494945.
  
     0.456
LOC101500094
Uncharacterized protein LOC101500094.
  
     0.453
LOC101511862
Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic.
  
     0.449
LOC101490033
Protein WHAT'S THIS FACTOR 9, mitochondrial.
  
     0.426
LOC101492612
LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g71210, mitochondrial.
  
     0.419
LOC101506650
Protein WHAT'S THIS FACTOR 9, mitochondrial.
  
     0.414
LOC101502508
RAP domain-containing protein, chloroplastic.
  
     0.406
LOC101503069
Uncharacterized protein LOC101503069.
  
     0.403
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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