STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101499188Uncharacterized protein LOC101499188. (317 aa)    
Predicted Functional Partners:
LOC101497986
Uncharacterized protein LOC101497986.
  
     0.486
LOC101514293
Uncharacterized protein LOC101514293 isoform X1.
  
     0.480
LOC101488556
Uncharacterized protein LOC101488556.
  
     0.475
LOC101510688
R3H domain-containing protein 4.
  
     0.470
LOC101511538
Polycomb group protein EMF2B-like.
  
     0.439
LOC101496023
Uncharacterized protein LOC101496023 isoform X1.
  
     0.437
LOC101515741
LOW QUALITY PROTEIN: RAB6A-GEF complex partner protein 1.
  
     0.427
LOC101495233
Trafficking protein particle complex II-specific subunit 120 homolog.
  
     0.424
LOC101504522
E3 SUMO-protein ligase SIZ1-like.
  
     0.423
LOC101492390
B3 domain-containing protein Os07g0679700-like.
  
     0.418
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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