STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101499440Uncharacterized protein LOC101499440. (757 aa)    
Predicted Functional Partners:
LOC101493645
60S ribosomal protein L5-like.
    
 
 0.682
LOC101512901
60S ribosomal protein L5.
    
 
 0.581
LOC101499289
Peter Pan-like protein.
   
    0.559
LOC101515036
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.527
LOC101511449
Ribosome production factor 2 homolog.
   
 
 0.525
LOC101491564
Ribosome production factor 2 homolog.
   
 
 0.525
LOC101490488
Ribosome production factor 2 homolog.
   
 
 0.525
LOC101504958
Periodic tryptophan protein 2.
   
    0.493
LOC101496233
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.489
rl5
60S ribosomal protein L11-like; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.489
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
Server load: low (18%) [HD]