STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1014953963'-5' exoribonuclease 1-like. (422 aa)    
Predicted Functional Partners:
LOC101511841
60S ribosomal protein L30.
     
 0.496
LOC101510915
60S ribosomal protein L30-like.
     
 0.496
LOC101504736
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial.
      
 0.468
LOC101499762
60S ribosomal protein L8-3-like.
   
 
  0.463
LOC101499226
60S ribosomal protein L8-3.
   
 
  0.463
LOC101501991
Uncharacterized protein LOC101501991.
   
 
  0.459
LOC101506495
Uncharacterized protein LOC101506495 isoform X1.
   
 
  0.459
LOC101499023
Exosome complex exonuclease RRP46 homolog isoform X1.
   
 0.450
LOC101509298
60S ribosomal protein L4-like.
     
 0.447
LOC101510013
60S ribosomal protein L4.
     
 0.447
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.