STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101514998RGG repeats nuclear RNA binding protein A-like. (371 aa)    
Predicted Functional Partners:
LOC101493645
60S ribosomal protein L5-like.
   
 
 0.948
LOC101492631
60S ribosomal protein L21-1-like.
   
 
 0.930
LOC101505459
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.925
LOC101504427
Uncharacterized protein LOC101504427 isoform X1.
   
 
 0.925
LOC101508045
60S ribosomal protein L13a-4; Belongs to the universal ribosomal protein uL13 family.
   
   0.919
LOC101514831
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
   0.913
LOC101512901
60S ribosomal protein L5.
   
 
 0.913
LOC101495565
60S ribosomal protein L31.
   
 
 0.911
LOC101501028
60S ribosomal protein L31-like.
   
 
 0.911
LOC101509298
60S ribosomal protein L4-like.
   
 
 0.910
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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