STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101492871DNA-directed RNA polymerase I subunit 2-like. (371 aa)    
Predicted Functional Partners:
LOC101507754
DNA-directed RNA polymerase I subunit rpa49.
   
 0.984
LOC101497159
Uncharacterized protein LOC101497159.
   
 0.979
LOC101494253
DNA-directed RNA polymerases II, IV and V subunit 6A-like.
  
 0.977
LOC101490748
RNA polymerase I-specific transcription initiation factor RRN3.
   
 0.968
LOC101494736
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.963
LOC101514434
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.949
LOC101488843
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 0.949
LOC101508940
DNA-directed RNA polymerases I and III subunit RPAC2.
   
 0.946
LOC101509663
DNA-directed RNA polymerases I and III subunit RPAC1-like.
  
 0.933
LOC101507815
DNA-directed RNA polymerases I and III subunit RPAC1-like.
  
 0.933
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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