STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101498378Protein SUPPRESSOR OF QUENCHING 1, chloroplastic-like. (179 aa)    
Predicted Functional Partners:
LOC101494112
ubiquitin-40S ribosomal protein S27a.
    
 0.611
UBQ5
Ubiquitin 5.
    
 0.611
LOC101510661
Serine--glyoxylate aminotransferase-like.
    
 0.577
LOC101491355
Serine--glyoxylate aminotransferase isoform X2.
    
 0.577
LOC101512277
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 isoform X1.
    
 0.556
LOC101494174
Proteasome activator subunit 4-like.
  
    0.501
LOC101501819
LOW QUALITY PROTEIN: proteasome activator subunit 4-like.
  
    0.493
LOC101490142
ubiquitin-60S ribosomal protein L40.
    
  0.488
LOC101508029
DEAD-box ATP-dependent RNA helicase 35.
    
 0.477
LOC101508734
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.477
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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