STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101502550F-box/LRR-repeat protein At3g48880. (305 aa)    
Predicted Functional Partners:
LOC101500123
Uncharacterized protein LOC101500123 isoform X1.
  
     0.497
LOC101492009
Protein TIFY 5A.
  
     0.489
LOC101501509
Protein SPEAR3-like.
  
     0.477
LOC105853084
Protein LURP-one-related 15-like.
  
 
  0.476
LOC101514092
Heavy metal-associated isoprenylated plant protein 28.
  
     0.474
LOC101504413
Pentatricopeptide repeat-containing protein At5g57250, mitochondrial.
  
     0.467
LOC101509630
Uncharacterized protein LOC101509630.
  
     0.457
LOC101494875
Remorin 4.2-like.
  
     0.457
LOC101502816
BON1-associated protein 2-like.
  
     0.450
LOC101513770
Remorin 4.1-like.
  
     0.447
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.