LOC101500467 protein (Cicer arietinum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC101500467

Heavy metal-associated isoprenylated plant protein 3 isoform X1. (304 aa)

Predicted Functional Partners:

LOC101512833

0.493

LOC101501525

0.466

LOC101513960

0.451

LOC101512299

0.451

LOC101506102

0.450

LOC101493764

0.445

LOC101502084

0.429

LOC101490554

0.425

LOC101508759

0.424

LOC101508853

0.424

Your Current Organism:

Cicer arietinum

NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101490554	LOC101493764	A0A1S2XMJ4	A0A1S2YI89	Fasciclin-like arabinogalactan protein 2.	Uncharacterized protein LOC101493764.	0.434
LOC101490554	LOC101500467	A0A1S2XMJ4	A0A1S3E6U5	Fasciclin-like arabinogalactan protein 2.	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	0.425
LOC101490554	LOC101506102	A0A1S2XMJ4	A0A1S3E863	Fasciclin-like arabinogalactan protein 2.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.473
LOC101490554	LOC101508759	A0A1S2XMJ4	A0A1S2Y532	Fasciclin-like arabinogalactan protein 2.	Uncharacterized protein LOC101508759.	0.451
LOC101490554	LOC101508853	A0A1S2XMJ4	A0A1S3DVB3	Fasciclin-like arabinogalactan protein 2.	Protein ROOT PRIMORDIUM DEFECTIVE 1.	0.500
LOC101490554	LOC101512299	A0A1S2XMJ4	A0A1S2Z6L3	Fasciclin-like arabinogalactan protein 2.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.500
LOC101490554	LOC101512833	A0A1S2XMJ4	A0A3Q7XY57	Fasciclin-like arabinogalactan protein 2.	Uncharacterized protein LOC101512833.	0.425
LOC101493764	LOC101490554	A0A1S2YI89	A0A1S2XMJ4	Uncharacterized protein LOC101493764.	Fasciclin-like arabinogalactan protein 2.	0.434
LOC101493764	LOC101500467	A0A1S2YI89	A0A1S3E6U5	Uncharacterized protein LOC101493764.	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	0.445
LOC101493764	LOC101501525	A0A1S2YI89	A0A1S2YLK5	Uncharacterized protein LOC101493764.	21 kDa protein-like.	0.461
LOC101493764	LOC101508853	A0A1S2YI89	A0A1S3DVB3	Uncharacterized protein LOC101493764.	Protein ROOT PRIMORDIUM DEFECTIVE 1.	0.457
LOC101500467	LOC101490554	A0A1S3E6U5	A0A1S2XMJ4	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	Fasciclin-like arabinogalactan protein 2.	0.425
LOC101500467	LOC101493764	A0A1S3E6U5	A0A1S2YI89	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	Uncharacterized protein LOC101493764.	0.445
LOC101500467	LOC101501525	A0A1S3E6U5	A0A1S2YLK5	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	21 kDa protein-like.	0.466
LOC101500467	LOC101502084	A0A1S3E6U5	A0A1S2XMW5	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	NDR1/HIN1-like protein 6.	0.429
LOC101500467	LOC101506102	A0A1S3E6U5	A0A1S3E863	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.	0.450
LOC101500467	LOC101508759	A0A1S3E6U5	A0A1S2Y532	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	Uncharacterized protein LOC101508759.	0.424
LOC101500467	LOC101508853	A0A1S3E6U5	A0A1S3DVB3	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	Protein ROOT PRIMORDIUM DEFECTIVE 1.	0.424
LOC101500467	LOC101512299	A0A1S3E6U5	A0A1S2Z6L3	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.	0.451
LOC101500467	LOC101512833	A0A1S3E6U5	A0A3Q7XY57	Heavy metal-associated isoprenylated plant protein 3 isoform X1.	Uncharacterized protein LOC101512833.	0.493