STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101507520LOW QUALITY PROTEIN: lipase-like PAD4. (632 aa)    
Predicted Functional Partners:
LOC101509849
Protein EDS1L-like.
  
 
0.928
LOC101508060
Protein EDS1L-like.
  
 
0.928
LOC101507110
Aminotransferase ALD1, chloroplastic-like.
      
 0.569
LOC101497855
Caffeoylshikimate esterase-like.
      
 0.568
LOC101507581
Calmodulin-binding protein 60 G-like.
   
  
 0.553
LOC101501390
Leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 isoform X1.
   
 0.534
LOC101496294
Isochorismate synthase, chloroplastic-like isoform X1.
   
  
 0.530
LOC101500982
Protein SAR DEFICIENT 1-like isoform X1.
   
  
 0.518
LOC101493920
Protein SAR DEFICIENT 1.
   
  
 0.518
LOC101507942
Delta(24)-sterol reductase.
      
 0.508
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.