STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101495785Protein JASON-like isoform X1. (472 aa)    
Predicted Functional Partners:
LOC101492339
Probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.934
LOC101492701
Uncharacterized protein LOC101492701.
   
 0.644
LOC101493594
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.644
LOC101496460
Elongation factor 1-delta 2-like; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.644
LOC101498149
Elongation factor 1-delta 2-like; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.644
LOC101499118
Homogentisate 1,2-dioxygenase.
  
 
 0.557
LOC101509663
DNA-directed RNA polymerases I and III subunit RPAC1-like.
   
 
 0.524
LOC101507815
DNA-directed RNA polymerases I and III subunit RPAC1-like.
   
 
 0.524
LOC101498093
DNA-directed RNA polymerases II, IV and V subunit 3-like.
   
 
 0.524
LOC101490271
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
  
     0.510
Your Current Organism:
Cicer arietinum
NCBI taxonomy Id: 3827
Other names: C. arietinum, Cicer arietinum L., chickpea, garbanzo
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.