STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0207Ester cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
c104_12
Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.781
c104_13
Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.779
SPRI_1088
FAD-dependent oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.544
snoaC
Methylase involved in ubiquinone/menaquinone biosynthesis; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.514
SPRI_0896
ATPase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.490
SPRI_3658
LysR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.473
c104_15
Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.437
SPRI_4054
Pectate_lyase_3 domain containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.423
SPRI_5621
Lipoprotein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.414
SPRI_1115
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.407
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.