Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SPRI_0207 | c104_12 | SPRI_0207 | SPRI_0208 | Ester cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.781 |
SPRI_0207 | c104_13 | SPRI_0207 | SPRI_0209 | Ester cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.779 |
SPRI_0207 | c104_15 | SPRI_0207 | SPRI_0210 | Ester cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.437 |
SPRI_2155 | c104_15 | SPRI_2155 | SPRI_0210 | Two-component system sensor kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.504 |
c104_12 | SPRI_0207 | SPRI_0208 | SPRI_0207 | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Ester cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.781 |
c104_12 | c104_13 | SPRI_0208 | SPRI_0209 | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.838 |
c104_12 | c104_15 | SPRI_0208 | SPRI_0210 | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.472 |
c104_13 | SPRI_0207 | SPRI_0209 | SPRI_0207 | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Ester cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.779 |
c104_13 | c104_12 | SPRI_0209 | SPRI_0208 | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.838 |
c104_13 | c104_15 | SPRI_0209 | SPRI_0210 | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.472 |
c104_15 | SPRI_0207 | SPRI_0210 | SPRI_0207 | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Ester cyclase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.437 |
c104_15 | SPRI_2155 | SPRI_0210 | SPRI_2155 | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Two-component system sensor kinase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.504 |
c104_15 | c104_12 | SPRI_0210 | SPRI_0208 | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.472 |
c104_15 | c104_13 | SPRI_0210 | SPRI_0209 | Stress protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | Putative nucleoside-diphosphate sugar epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. | 0.472 |