Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
c101_13Putative enzyme involved in biosynthesis of extracellular polysaccharides; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
snoaC
Methylase involved in ubiquinone/menaquinone biosynthesis; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
  0.900
SPRI_0241
Putative NDP-hexose-4 ketoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.480
c101_14
Methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.477
c101_15
Putative dTDP-4-deoxyglucose 3,5-epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.477
c101_11c
Putative ABC transporter; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.475
c101_12c
Daunorubicin resistance ABC transporter ATP-binding subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.475
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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