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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c101_14Methyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (418 aa)    
Predicted Functional Partners:
c101_15
Putative dTDP-4-deoxyglucose 3,5-epimerase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.979
SPRI_2013
NAD dependent epimerase/dehydratase family protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
   
 0.817
SPRI_2011
Glucose-1-phosphate cytidylyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.800
SPRI_0241
Putative NDP-hexose-4 ketoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.779
SPRI_2012
N-acetylglucosaminylphosphatidylinositol deacetylase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.766
SPRI_2014
Peptidase M28; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
   0.677
SPRI_2019
Glutamate-1-semialdehyde 2,1-aminomutase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.559
SPRI_2016
Glycosyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.534
SPRI_0186
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.514
SPRI_7167
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
 
 0.514
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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