Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cpp8Acyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (411 aa)    
Predicted Functional Partners:
cpp9
Cytochrome P450; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.
       0.773
cpp7
FAD-dependent/BBE domain-containing oxidoreductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.707
cpp6
Putative oxygenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.622
cpp5
Putative acyl carrier protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.609
cpp4
Putative ketoacylsynthase, chain length factor beta-subunit; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.551
cpp27
Putative C-glycosyltransferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.477
SPRI_5696
ATP-binding protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.465
SPRI_3222
DGQHR domain protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.430
SPRI_6789
Restriction endonuclease; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.418
SPRI_2619
Superoxide dismutase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.416
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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