Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
snaQLuciferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (360 aa)    
Predicted Functional Partners:
snaP
Thioesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.764
snaO
Sarcosine oxidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.758
papR2
Transcriptional activator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
    0.642
snaA
Pristinamycin IIA synthase subunit A; Catalyzes the oxidation of the proline residue of pristinamycin IIB (PIIB) to pristinamycin IIA (PIIA).
  
  
 0.633
snaB
Alkanesulfonate monooxygenase; Catalyzes the oxidation of the proline residue of pristinamycin IIB (PIIB) to pristinamycin IIA (PIIA).
  
  
 0.533
snaX
Isochorismatase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
     
 0.522
SPRI_7168
Pristinamycin IIA synthase subunit A; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
  
 0.515
SPRI_0186
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.492
SPRI_7167
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.492
SPRI_6783
5,10-methylene tetrahydromethanopterin reductase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.477
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.