Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
snaE4Hybrid NRPS/PKS (PKSIV); Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (2686 aa)    
Predicted Functional Partners:
SPRI_0186
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
0.937
SPRI_7167
PII peptide synthetase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
0.937
snaN
4-phosphopantetheinyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.
 
 
 0.923
snaP
Thioesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.846
SPRI_7063
4-phosphopantetheinyl transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.831
SPRI_3482
Hypothetical protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.
 
 
 0.825
snaI
3-hydroxy-3-methylglutaryl-ACP synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.820
c104_10c
Thiamine biosynthesis protein ThiF; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.
 
 
 0.810
SPRI_7156
Thiamine biosynthesis protein ThiF; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
 
 0.810
SPRI_7068
Thioesterase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.801
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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