Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0348TetR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology. (199 aa)    
Predicted Functional Partners:
SPRI_0347
Glycerol-3-phosphate dehydrogenase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.872
SPRI_0349
Alkyldihydroxyacetonephosphate synthase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.825
SPRI_0350
Transcription regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
     0.677
SPRI_5801
Lipase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.611
SPRI_4977
TetR family transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.430
SPRI_5817
Lipase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.427
SPRI_1118
Toxin-antitoxin system toxin component; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.419
SPRI_5498
CoA-transferase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.418
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.