STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPRI_0395Glycoside hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family. (804 aa)    
Predicted Functional Partners:
SPRI_0872
Glycoside hydrolase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.604
SPRI_6751
Family 31 glucosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.576
SPRI_1824
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.571
SPRI_6590
alpha-L-arabinofuranosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.512
SPRI_0396
Transcriptional regulator; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
       0.490
SPRI_5850
DUF1343 domain-containing protein; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
  
 0.457
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
     0.448
SPRI_6649
1,4-beta-xylanase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.421
SPRI_6572
Arabinogalactan endo-1 4-beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
  
     0.417
SPRI_6573
Beta-galactosidase; Derived by Prodigal V2.6.2 analysis using gene prediction method: Protein Homology.
 
   
 0.404
Your Current Organism:
Streptomyces pristinaespiralis
NCBI taxonomy Id: 38300
Other names: S. pristinaespiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.